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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792055.1_cds_XP_016510267.1_2236
CDS Infomation

[gene=LOC107827597] [db_xref=GeneID:107827597] [protein=protein PAIR1-like isoform X2] [protein_id=XP_016510267.1] [location=join(96459..96523,97073..97289,98190..98334,98460..98594,98806..98858,98940..99134,99230..99295,99402..99448,100067..100211,100467..100548,101700..101806)] [gbkey=CDS]
Sequence

ATGAAGTTGAAGATTAACAAAGCCTCCGATCTCAGCTCCATCTCTGTTCTTCCTCCTCAT
GCAAGGAGGCCAAGTGCGGTACCAAGTGCAGCAGAGTCTTCCGTCTTCGGGAAAAGCCAA
GCGTCACAAGTTCGATCACAGCAGCAATCACAACAATCCTTCTCACAGATTCGGTCACAG
CAGCAATCACAACAATCCTTCTCACAGGGATTTTCATCTCAGCAACCGATGTACTCTCAG
CTATCGCAGAGCTCTCTGGATGAATTTGCCCCTAATGAGCAAAGATTGGGTTCTCAAGAA
AGAGAAAATTCAGCAAAGAGGATGAGCTGTTTGCCTCAAATCAACTATACACGAGAAGAG
AGTCAAATGCAGCTATCTAAACCTTCAGGCAATTATATGCGCAAGTGGTCAGTTCCTGAA
AACAAATCCCAGATTACTGAAGAACTTGAACACAAAATTGGAATGGTAGAGACTTCGTTA
AGCAGGCTAGGAATGATCTTAGATTCTGTTCAGAGTGATATTATGCAAGTTAACCGGGGA
ACGAAAGAGATATTGATGGAGATGGAAAGCTTACGGCCGAAGTTAGCAGCTCATGATGAA
CTGTTGCAATTAATGAACAAGGGGAGGGAAGATCTGAAAGCTAGCATGGAAGAGACCTTC
AAATCCATGTTTGAAGAGCTGAGGGAGAATAAATATCAAGAGAACATCCGGGATCTTTCA
TCACTGGTTAGAGCTATGCCCAACAAACTGGAGATGTGCATTTTGCAACTGCAAACGGAC
TTGAGCAAGACCTTGGCTAAAGAGATTCAGACAGCTTCCCTCCCCCCAGATTGTCCCGGA
CAAAAACATGAAACTGCTCTGGCCGTTCAACCGAAAGGTATCAATGATTGTTTCCCTCCC
CCTGAAGTGAAGTTTCTCAAGAATTCAACAATGAATATCAAAGATCAGAAAACAACTATG
TTGCCGAAGACTGAAACAGGAGGCTGGAAAACAGTGAAACATGACCAAACTTGTGTGAAG
CAGAAAATTTCCAGCAGAAGTCACAAACAGAATAAAGCATTTCAACAGGAAAGGGAATTT
GGAGTTACCATTGAATCTGATGAGGATATTGACACAGGCTTTTCCTGCTTGCTTGAAGAA
AATGGATCAGGCGCTGGGATTTGTCCAATAGAGGATGCAAAGGAAGAGAGTGCACGCATA
TTAAGGAAAGCAAGGAGGCGAAAGAGAAAGCATCTTAACACTATCATTATAGATTGA

Peptide Sequence

PEP ID

XP_016510267.1
PEP Infomation

PREDICTED: protein PAIR1-like isoform X2 [Nicotiana tabacum]
Sequence

MKLKINKASDLSSISVLPPHARRPSAVPSAAESSVFGKSQASQVRSQQQSQQSFSQIRSQ
QQSQQSFSQGFSSQQPMYSQLSQSSLDEFAPNEQRLGSQERENSAKRMSCLPQINYTREE
SQMQLSKPSGNYMRKWSVPENKSQITEELEHKIGMVETSLSRLGMILDSVQSDIMQVNRG
TKEILMEMESLRPKLAAHDELLQLMNKGREDLKASMEETFKSMFEELRENKYQENIRDLS
SLVRAMPNKLEMCILQLQTDLSKTLAKEIQTASLPPDCPGQKHETALAVQPKGINDCFPP
PEVKFLKNSTMNIKDQKTTMLPKTETGGWKTVKHDQTCVKQKISSRSHKQNKAFQQEREF
GVTIESDEDIDTGFSCLLEENGSGAGICPIEDAKEESARILRKARRRKRKHLNTIIID

Transcript Sequence

Gene sequence data has not been registered.